San Diego, California Compensation Guide

Data Scientist Salary in San Diego, California

Comprehensive 2026 compensation analysis for Data Scientists in San Diego. Explore local wage distributions, net take-home pay, state tax implications, and rental affordability.

San Diego Median Pay
$165,500
$13,792/month gross
vs. National Benchmark
+20%
National avg: $138,000
Net Monthly Take-Home
$9,889
After federal & state taxes
Rent-to-Income Ratio
25%
1-bed rent: $2,450/mo
State Income Tax: 9.3% estimated state & local tax burden
Explore all San Diego salaries

Data Scientist Salary Percentiles in San Diego

Data sourced from U.S. Bureau of Labor Statistics (BLS) OEWS and adjusted for San Diego, California metro market factors.

10th Percentile
$102,000
Entry level
25th Percentile
$132,000
Early career
50th (Median)
$165,500
Metro benchmark
75th Percentile
$210,000
Senior level
90th Percentile
$261,500
Staff / Lead

Estimated Paycheck & Tax Withholdings

Annual Gross Salary:$165,500
Estimated Federal Income Tax:-$31,445
Estimated State/Local Tax (9.3%):-$15,392
Annual Net Take-Home:$118,663
Monthly Budget Breakdown
Net Monthly Paycheck:$9,889
Median 1-Bed Rent:-$2,450
Discretionary Income:~$7,439/mo

Compare Data Scientist in San Diego vs. Other Cities

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San Diego vs. San FranciscoSan Diego vs. San Jose (Silicon Valley)San Diego vs. SeattleSan Diego vs. Los AngelesSan Diego vs. PortlandSan Diego vs. SacramentoSan Diego vs. AustinSan Diego vs. Dallas-Fort Worth

Frequently Asked Questions: Data Scientist in San Diego

What is the average Data Scientist salary in San Diego?

The median base salary for a Data Scientist in San Diego, California is $165,500 per year ($13,792/month). Entry-level roles start around $102,000, while senior and staff-level professionals earn up to $261,500.

How does San Diego Data Scientist pay compare to the national average?

Data Scientist salaries in San Diego are 20% above the U.S. national benchmark of $138,000.

What is the estimated monthly take-home pay for a Data Scientist in San Diego?

At the median salary of $165,500, the estimated monthly net take-home pay in San Diego is approximately $9,889 after deducting estimated federal taxes ($2,620/mo) and state/local taxes ($1,283/mo).

Is San Diego affordable for a Data Scientist?

With an average 1-bedroom rent of $2,450/month, housing consumes approximately 25% of a Data Scientist's estimated net take-home pay, which is well within the recommended 30% financial guideline.

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